George Mason University | Ganiraju Manyam, Ancha Baranova
KPP: KEGG Pathway Painter
USE YOUR GENE EXPRESSION LISTS TO PAINT KEGG PATHWAYS
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Paint Pathways
How KPP works?
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Paint Pathways
Select type of gene identifier:
NCBI_GENE_ID
NCBI_GI_ACC
UNIPROT_ID
choose correct ID type
Upload gene lists
[limit each list to 500 genes]
Upregulated genes:
Downregulated genes:
Choose graphic representation Of up and down regulated events
Font color:
yellow
white
green
black
red
blue
Background color (upregulated genes)
red
yellow
white
green
black
blue
Background color (downregulated genes)
blue
yellow
white
green
black
red
Choose threshold parameters to filter the extracted pathways
Minimum number of genes in each pathway:
1
2
3
4
5
Ratio of painted genes to the total number of genes in a given pathway:
%